• Mashup Score: 2
    Nextstrain - 10 month(s) ago

    Real-time tracking of pathogen evolution

    Source: nextstrain.org
    Categories: Infectious Disease, Latest Headlines
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      profvrr

      From ASV 2023 in Athens, Georgia, Vincent, Kathy & Brianne speak with Trevord Bedford about his career, the development of https://t.co/0WwpL33wvX for real-time tracking of pathogen evolution & evolution of SARS-CoV-2 from January 2020 through Omicron. 📺 https://t.co/pCDyLo5ptj https://t.co/1200hBVuXj

  • Mashup Score: 7
    Nextstrain / enterovirus / d68 / vp1 - 2 year(s) ago

    Phylodynamics of Enterovirus D68 – VP1

    Source: nextstrain.org
    Categories: Infectious Disease, Latest Headlines
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      firefoxx66

      📡#Enterovirus #D68 #EVD68 builds on @nextstrain are now updated 📡 You can check out the VP1 (single-gene) build (https://t.co/LKeFGzGGby) & full-genome builds (https://t.co/kM65JGdVsw). I'll give a brief overview of a few things of interest... 1/7 https://t.co/p1XrsoXy7g https://t.co/mafPIgt61a

  • Mashup Score: 2
    Nextstrain / monkeypox / hmpxv1 - 2 year(s) ago

    Genomic epidemiology of monkeypox virus

    Source: nextstrain.org
    Categories: Infectious Disease, Latest Headlines
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      firefoxx66

      Why is #opendata useful? It's much easier for scientists to share, create tools for, & publicly analyze open sequences. For example, @Nextstrain creates the #monkeypox builds with open data & provides curated seqs+meta https://t.co/fYUJDNrwSv https://t.co/C4VzXbLo7q

  • Mashup Score: 17
    Nextstrain / monkeypox / hmpxv1 - 2 year(s) ago

    Genomic epidemiology of monkeypox virus

    Source: nextstrain.org
    Categories: Infectious Disease, Latest Headlines
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      firefoxx66

      Possible co-infection of #monkeypox in a UK traveller, with unique genotypes from different lesions. Reminds us to be cautious in ruling out links from only 1 sample. You can see the sequences on @nextstrain here: https://t.co/GykeLu8HrI (Thanks to @CorneliusRoemer for the link!) https://t.co/dw4lYOAoBQ

  • Mashup Score: 57
    Nextstrain / monkeypox - 2 year(s) ago

    Genomic epidemiology of monkeypox virus

    Source: nextstrain.org
    Categories: Infectious Disease, Latest Headlines
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      firefoxx66

      The four new #monkeypox sequences from Florida, Texas, Virginia, & Maryland (across 2021-2022) are now live at @nextstrain. Really grateful to @CDCgov's fast #opendata sharing, which allows us to integrate these easily & quickly for others to view. https://t.co/6WCphWopy5 https://t.co/3QB2dxhQuM https://t.co/HyYwe07gXk

  • Mashup Score: 46
    Nextstrain / monkeypox - 2 year(s) ago

    Genomic epidemiology of monkeypox virus

    Source: nextstrain.org
    Categories: Healthcare Professionals, Latest Headlines
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      trvrb

      @HelenBranswell @CDCgov @firefoxx66 You can see sequences from Florida (MPXV_USA_2022_FL001) and Virginia (MPXV_USA_2022_VA001) up at https://t.co/EgWDVnoSrh now. Both genomes and their connecting branch show patterns of mutation suggestive of continued faster evolution via APOBEC editing.

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