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Mashup Score: 0
Background Circadian rhythms of host immune activity and their microbiomes are likely pivotal to health and disease resistance. The integration of chronotherapeutic approaches to disease mitigation in managed animals, however, is yet to be realised. In aquaculture, light manipulation is commonly used to enhance growth and control reproduction but may have unknown negative consequences for animal…
Source: MicrobiomeCategories: General Medicine Journals and Societies, Latest HeadlinesTweet
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Mashup Score: 9Recovery of strain-resolved genomes from human microbiome through an integration framework of single-cell genomics and metagenomics - Microbiome - 3 year(s) ago
Background Obtaining high-quality (HQ) reference genomes from microbial communities is crucial for understanding the phylogeny and function of uncultured microbes in complex microbial ecosystems. Despite improvements in bioinformatic approaches to generate curated metagenome-assembled genomes (MAGs), existing metagenome binners obtain population consensus genomes but they are nowhere comparable…
Source: MicrobiomeCategories: General Medicine Journals and Societies, Latest HeadlinesTweet-
An article published in @MicrobiomeJ introduces SMAGLinker, a single-cell genomics and metagenomics integration framework that can be used to recover high-quality genomes of multiple bacterial strains from the microbial community at once. Read it here: https://t.co/PXYwTBBOGD https://t.co/ySRyxC7LqN
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Mashup Score: 2Microbial growth and volatile organic compound (VOC) emissions from carpet and drywall under elevated relative humidity conditions - Microbiome - 3 year(s) ago
Background Microbes can grow in indoor environments if moisture is available, and we need an improved understanding of how this growth contributes to emissions of microbial volatile organic compounds (mVOCs). The goal of this study was to measure how moisture levels, building material type, collection site, and microbial species composition impact microbial growth and emissions of mVOCs. We…
Source: MicrobiomeCategories: General Medicine Journals and Societies, Latest HeadlinesTweet-
A study published in @MicrobiomeJ reveals differences in microbial growth and microbial volatile organic compound emissions between different building materials for developing management and mitigation strategies to maintain healthy indoor environments. https://t.co/rcy3KZVvzx https://t.co/dpYvdTVJf0
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Mashup Score: 0Recovery of strain-resolved genomes from human microbiome through an integration framework of single-cell genomics and metagenomics - Microbiome - 3 year(s) ago
Background Obtaining high-quality (HQ) reference genomes from microbial communities is crucial for understanding the phylogeny and function of uncultured microbes in complex microbial ecosystems. Despite improvements in bioinformatic approaches to generate curated metagenome-assembled genomes (MAGs), existing metagenome binners obtain population consensus genomes but they are nowhere comparable…
Source: MicrobiomeCategories: General Medicine Journals and Societies, Latest HeadlinesTweet-
An article published in @MicrobiomeJ introduces SMAGLinker, a single-cell genomics and metagenomics integration framework that can be used to recover high-quality genomes of multiple bacterial strains from the microbial community at once. Read it here: https://t.co/nKY0mXmuxW https://t.co/eOSouhN7qn
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Mashup Score: 4
Background The microorganisms that inhabit food processing environments (FPE) can strongly influence the associated food quality and safety. In particular, the possibility that FPE may act as a reservoir of antibiotic-resistant microorganisms, and a hotspot for the transmission of antibiotic resistance genes (ARGs) is a concern in meat processing plants. Here, we monitor microbial succession and…
Source: MicrobiomeCategories: General Medicine Journals and Societies, Latest HeadlinesTweet-
A study published in @MicrobiomeJ found that pig carcasses are a source of resistant bacteria in food processing environments, and drains and contact surfaces are a reservoir for the spread of antibiotic resistance genes. https://t.co/3PvBdwnz0k https://t.co/jCFtUBmWVG
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Mashup Score: 3Active virus-host interactions at sub-freezing temperatures in Arctic peat soil - Microbiome - 3 year(s) ago
Background Winter carbon loss in northern ecosystems is estimated to be greater than the average growing season carbon uptake and is primarily driven by microbial decomposers. Viruses modulate microbial carbon cycling via induced mortality and metabolic controls, but it is unknown whether viruses are active under winter conditions (anoxic and sub-freezing temperatures). Results We used stable…
Source: MicrobiomeCategories: Latest HeadlinesTweet-
Research published in @MicrobiomeJ reveals that viruses are major determinants of community structure and carbon loss in peat soils during winter. Read the study here: https://t.co/0Eml6WDxkU https://t.co/VL4N2BaI5B
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Mashup Score: 5Recovery of strain-resolved genomes from human microbiome through an integration framework of single-cell genomics and metagenomics - Microbiome - 3 year(s) ago
Background Obtaining high-quality (HQ) reference genomes from microbial communities is crucial for understanding the phylogeny and function of uncultured microbes in complex microbial ecosystems. Despite improvements in bioinformatic approaches to generate curated metagenome-assembled genomes (MAGs), existing metagenome binners obtain population consensus genomes but they are nowhere comparable…
Source: MicrobiomeCategories: General Medicine Journals and Societies, Latest HeadlinesTweet-
An article published in @MicrobiomeJ introduces SMAGLinker, a single-cell genomics and metagenomics integration framework that can be used to recover high-quality genomes of multiple bacterial strains from the microbial community at once. Read it here: https://t.co/nKY0mXmuxW https://t.co/kJmDQvn2MU
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Mashup Score: 0Understanding the Microbiome | The Power of the Microbiome - 3 year(s) ago
The human microbiome has a strong influence on metabolism and immunity. Learn about how the power of the microbiome may break the cycle of recurrent C. diff.
Source: MicrobiomeCategories: Infectious Disease, Latest HeadlinesTweet-
*Sponsored Post* #ICYMI: Didn’t catch the @FerringMbiome’s “The Power of the Microbiome” Learning Lounge @IDWeek2021? Learn more about it by clicking the link here: https://t.co/aJ7zpbcHgg #IDWeek2021 https://t.co/uRzMBPXGgT
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Mashup Score: 0Metagenomic analysis of ancient dental calculus reveals unexplored diversity of oral archaeal Methanobrevibacter - Microbiome - 3 year(s) ago
Background Dental calculus (mineralised dental plaque) preserves many types of microfossils and biomolecules, including microbial and host DNA, and ancient calculus are thus an important source of information regarding our ancestral human oral microbiome. In this study, we taxonomically characterised the dental calculus microbiome from 20 ancient human skeletal remains originating from…
Source: MicrobiomeCategories: General Medicine Journals and Societies, Latest HeadlinesTweet-
A study published in @MicrobiomeJ suggests that there has been a possible shift and decline of diversity in the human oral microbiome member Methanobrevibacter over the last millennia. Read the research to find out more: https://t.co/Op7V2uzIt6
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Mashup Score: 0Successional dynamics and alternative stable states in a saline activated sludge microbial community over 9 years - Microbiome - 3 year(s) ago
Background Microbial communities in both natural and applied settings reliably carry out myriads of functions, yet how stable these taxonomically diverse assemblages can be and what causes them to transition between states remains poorly understood. We studied monthly activated sludge (AS) samples collected over 9 years from a full-scale wastewater treatment plant to answer how complex AS…
Source: MicrobiomeCategories: General Medicine Journals and Societies, Latest HeadlinesTweet-
A study published in @MicrobiomeJ reports that microbial communities can assume different stable states under highly similar environmental conditions and irregular disturbances may lead to a rapid shift in community composition. Read the study here: https://t.co/4hPDGPr1Xa https://t.co/830iZup5jr
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Keeping fish under constant light — a practice used by fish farms to enhance growth or control reproduction — disrupts the daily rhythms of fish and leads to increased susceptibility to parasites. Read this article published in @MicrobiomeJ. https://t.co/xWQEqII8j7 https://t.co/tSgt7uPoVs