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Mashup Score: 0
Skalidis et al. present an AI-assisted, cryo-EM image analysis, model identification, and reconstruction pipeline. After the integration of traditional biochemical sample characterization and external database information, they obtain structural insights from multiple, simultaneously resolved atomic models of megadalton-range protein community members, directly derived from eukaryotic native cell…
Source: StructureCategories: General Medicine News, Latest HeadlinesTweet
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Mashup Score: 2
Fowler and Williamson compared AlphaFold2 and NMR structures for 904 human proteins. The best NMR structures in each ensemble are of comparable accuracy to AlphaFold2 (AF2). In 30% of cases, AF2 is significantly better, mainly in hydrogen-bond networks; in 2% of cases, NMR is better, mainly in dynamic regions.
Source: StructureCategories: General Medicine News, Latest HeadlinesTweet
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Mashup Score: 1
Ritzmann et al. employ SMFS to investigate BamA, the central unit of the BAM complex of E. coli. They quantify how the antibiotic darobactin modulates the mechanical, kinetic, and energetic properties of the POTRA domains, the linker domain, and the β-hairpins of the transmembrane β-barrel of BamA.
Source: StructureCategories: General Medicine News, Latest HeadlinesTweet
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Mashup Score: 0
In this review, Graziadei and Rappsilber discuss how cross-linking mass spectrometry has contributed to structural biology and to the mapping of protein-protein interactions. The review emphasizes data analysis, error estimation, and integrative modeling tools, thus providing a comprehensive overview of how to apply this technique in structural and cell biology.
Source: StructureCategories: General Medicine News, Latest HeadlinesTweet
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Mashup Score: 1Small, but powerful and attractive: 19F in biomolecular NMR - 2 year(s) ago
Introduction of a fluorine atom into a protein provides a sensitive probe for probing structure and dynamics by 1D 19F NMR.
Source: StructureCategories: General Medicine News, Latest HeadlinesTweet
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Mashup Score: 2Recent advances in small-angle scattering and its expanding impact in structural biology - 2 year(s) ago
This review highlights how recent technical advances in small-angle X-ray and neutron scattering with contrast variation have contributed to our expanding knowledge of biomolecular complexes and assemblies as large as whole cells, membrane proteins in lipid environments, lipid structures, and dynamic systems on time scales ranging from femtoseconds to hours.
Source: StructureCategories: General Medicine News, Latest HeadlinesTweet
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Mashup Score: 3Cryo-EM structure of CtBP2 confirms tetrameric architecture - 3 year(s) ago
CtBP has been implicated in the progression of many cancers. Cryo-EM structures show that NADH-activated CtBP is a tetramer; mutants that disrupt this tetrameric assembly are defective for oncogenic activity. These results establish the CtBP2 tetramer as transcriptionally active and suggest targeting the tetrameric assembly by cancer therapeutics.
Source: StructureCategories: General Medicine News, Latest HeadlinesTweet
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Mashup Score: 4
Nojima and Fujita et al. determined the cryo-EM structure of prostaglandin E receptor EP4 bound to the heterotrimeric G protein and the endogenous ligand PGE2. The structure reveals the novel binding mode between GPCRs and Gs, which provides us the information for the structure-based activation mechanism of prostanoid receptors.
Source: StructureCategories: General Medicine News, Latest HeadlinesTweet
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Mashup Score: 3
Heart contraction depends on interactions between actin and myosin molecules. The cardiac actomyosin interface remained unknown. The structure of cardiac actomyosin complex at near-atomic resolution by Risi et al. provides molecular details of the actomyosin interface and reveals molecular basis of cardiac diseases caused by mutations in actin and myosin.
Source: StructureCategories: General Medicine News, Latest HeadlinesTweet
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Mashup Score: 5Cryo-EM structure of an open conformation of a gap junction hemichannel in lipid bilayer nanodiscs - 3 year(s) ago
Khan et al. report the cryo-EM structure of a Cx26 gap junction hemichannel and reveal conservation in the 4-helix bundle within each subunit and the open pore structure compared with the docked GJC. Unlike GJCs, the extracellular loops display conformational flexibility, which may facilitate surveillance and docking of compatible hemichannels in apposed cells.
Source: StructureCategories: General Medicine News, Latest HeadlinesTweet
Check out this article: Cryo-EM and artificial intelligence visualize endogenous protein community members, by Panagiotis L. Kastritis @3Dstructure @UniHalle & others, published in @Structure_CP #bps2023 https://t.co/x6z39lqnpr