• Mashup Score: 78

    This functionality was made available in version 7.3.0 of FreeSurfer. Please note that version 2.0 of the tool is being released in the development version on February 6th 2023. Author: Juan Eugenio Iglesias E-mail: jiglesiasgonzalez [at] mgh.harvard.edu Rather than directly contacting the author, please post your questions on this module to the FreeSurfer mailing list at freesurfer…

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    • RT @JuanEugenioIgl1: SynthSR 2.0 is out in @ScienceAdvances and publicly available (https://t.co/s0pgP6T11e). SynthSR uses machine learnin…

  • Mashup Score: 15

    Introduction This page describes a deep learning tool, mri_sclimbic_seg, to automatically segment several subcorical limbic structures from T1-weighted images (“SC” = subcortical). The structures are shown in the figure below (note: anterior commissure is only present for reference reasons). Note there is another tool to segment the hypothalamic subunits. Those using this toolbox should cite: A…

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    • RT @FreeSurferMRI: Check out ScLimbic, our new tool for segmenting subcortical limbic structures. Documentation: https://t.co/vyiBli9hk0…

  • Mashup Score: 2

    TRACULA (TRActs Constrained by UnderLying Anatomy) is a tool for automatic reconstruction of a set of major white-matter pathways from diffusion-weighted MRI data. As the FreeSurfer cortical parcellation and subcortical segmentation use prior knowledge on the relative positions of anatomical structures with respect to each other, TRACULA uses prior knowledge on the relative positions of…

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    • RT @FreeSurferMRI: 🍝 New TRACULA 🍝 Release notes: https://t.co/WBMiTV9tdf Tutorials: https://t.co/kEEqDT3hBE Preprint: https://t.co/mLM5jDn…