• Mashup Score: 0

    Background Early detection has proven to be the most effective strategy to reduce the incidence and mortality of colorectal cancer (CRC). Nevertheless, most current screening programs suffer from low participation rates. A blood test may improve both the adherence to screening and the selection to colonoscopy. In this study, we conducted a serum-based discovery and validation of cfDNA methylation biomarkers for CRC screening in a multicenter cohort of 433 serum samples including healthy controls, benign pathologies, advanced adenomas (AA), and CRC. Results First, we performed an epigenome-wide methylation analysis with the MethylationEPIC array using a sample pooling approach, followed by a robust prioritization of candidate biomarkers for the detection of advanced neoplasia (AN: AA and CRC). Then, candidate biomarkers were validated by pyrosequencing in independent individual cfDNA samples. We report GALNT9, UPF3A, WARS, and LDB2 as new noninvasive biomarkers for the early detection o

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    • Glad to have participated in #colorectal #cancer #CRC screening study using DNA #methylation biomarkers in cell-free DNA #cfDNA of more than 400 samples; article published in Clinical Epigenetics @BioMedCentral led by Loretta De Chiara @cinbio_uvigo @uvigo https://t.co/CqBTwWmd6w https://t.co/NY9gyydutH

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    Inflammatory signals are key in development and cell differentiation but their orchestration with pluripotency and stemness signals is poorly understood. Our previous work identified a chromatin function of IκBα, the NF-κB inhibitor, that is crucial for differentiation in different types of somatic stem cells. Here we demonstrate that deficiency of IκBα imposes a profound chromatin rewiring defect that impacts on DNA methylation, histone post-translational modifications and transcriptional regulation, stabilizing mouse embryonic stem cells (ESCs) in a ground state of pluripotency while preventing them from pluripotency exit and differentiation. By engineering separation-of-function mutants of IκBα with specific binding to either NF-κB or histones, we demonstrate that regulation of pluripotency state by IκBα is independent of NF-κB but requires the chromatin-related IκBα function. ### Competing Interest Statement patent on IkBa SOF mutants

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    • Glad to help in @biorxivpreprint article by @BigSpinLab @CarrerasIJC @hospitaldelmar about how IκBα defect induces #chromatin rewiring by DNA #methylation and #histone modifications, preventing #embryonic stem cells #pluripotency exit and #differentiation https://t.co/nWRfVdbk04 https://t.co/vbTWZhCzaV

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    Chimeric antigen receptor (CAR) T cells provide new perspectives for treatment of hematological malignancies. Manufacturing of these cellular products includes culture expansion procedures, which may affect cellular integrity and therapeutic outcome. In this study, we investigated culture-associated epigenetic changes in CAR T cells and found continuous gain of DNAm, particularly within genes…

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    • Discovery with clinical implications, we just reported in @LeukemiaJnl that culture conditions modify DNA #methylation of Chimeric Antigen Receptor CAR-T cells affecting efficacy of #immunotherapy, research led by Wolfgang Wagner @lab_wagner @RWTH https://t.co/jKeuN3cwb9 https://t.co/WIURXOxpE5

  • Mashup Score: 2

    Most of the cancer-associated mortality and morbidity can be attributed to metastasis. The role of epigenetic and epitranscriptomic alterations in cancer origin and progression has been extensively demonstrated during the last years. Both regulations share similar mechanisms driven by DNA or RNA modifiers, namely writers, readers, and erasers; enzymes responsible of respectively introducing,…

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    • Online our article "Cancer metastasis under the magnifying glass of #epigenetics and #epitranscriptomics" in Cancer and #Metastasis Reviews @SpringerNature describing how DNA #methylation, and histone and RNA modifications contribute to dissemination https://t.co/AAH2PHZRpY https://t.co/1A814wOGeI